Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936309.1_cds_XP_016481933.1_73213
CDS Infomation

[gene=LOC107802870] [db_xref=GeneID:107802870] [protein=beta-amylase-like] [protein_id=XP_016481933.1] [location=complement(join(23239..23430,23541..23780,23888..24097,24202..24465,24574..24738,24839..25237,25336..25401,26634..26834))] [gbkey=CDS]
Sequence

ATGAATATCAACATGGCAAGCATTGGACCTTCAAAATTAGGTGTTATGCCGGAGGTAATG
GGATTTTCACACCAAGAACTGTCCCTTGTCATGTTTAAGAAATTCAAGCTGGCTAGAAAA
CAACTTCTTCAACAAAATCTGACATTTACTAATCGTCGAAAGACTGGAATTGCTCAAGCC
ATAGCTCCAGAAGCAACCAAGGCAACGGGTGCAACATCTAGCAGTGTCCCTTTAGCCAAC
TATGTGCCTGTTTATGTAATGCTTCCATTAGATGTTATTTCACTAGACAATGTTTTTCGG
AACCAAGATAAGTGTGAGAAGCAGTTCAAGGAGCTGAGAGCAGCCGGAGTTGATGGGATC
ATGGTGGATGTCTGGTGGGGAATCGTAGAGGCCAATGGCCCCAGGCAATATGATTGGTCT
GCCTACAGGAACTTGTTCCAACTTGTTCAAAAGACTGGCCTCAAAATTCAAGCTATTATG
TCGTTCCACCAATGTGGTGGCAATATTGGCGATGATGTTTACATACCTATACCAAAATGG
GTACTCACAATCGGAGAAAACAACCCAGATATTTTCTATACTAATCGGGCTGGTACCAGG
AATAAAGAATGCCTCTCACTTGCTGTTGATAACCAACCTCTGTTTGAAAGTCGGACTGCT
GTCCAGATGTACAGTGACTACATGAGGAGCTTCAGAGAGAACATGTCTGATTTCTTGGAA
GCTGGAAGCATAGTAGACATTGAGGTAGGACTTGGCCCTGCTGGTGAGCTAAGATATCCC
GCATATACTCAGTCTCAGGGATGGAAATTCCCTGGCATTGGAGAATTTCAGTGCTACGAC
AAGCATATGAGAACAGATTTCAAGGAGGCAGTGACAAAGGCAGGCTACCGGCAGTGGGAT
CTTCCTGATGATGCAGGAACATATAATGATATACCTGTCAAAACAGGATTCTTTGGACCA
AACGGAACGTACCTTACAGAGAAAGGGAAGTTCTTCTTGACTTGGTACTCTAGCAAGCTA
CTGCTTCATGGAGATCAGATCCTTGATGAAGCAAACAAGGCTTTCCTGGGATGCAAAGTG
AAGCTATCAGCTAAAGTTGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCA
GAGCTAACATCAGGATATTATAATTTGGACAATCGAGAAGGGTATCGACCGATAGCGAGG
ATGTTGTCAAGGCACCATGGTACCTTGAATTTCACTTGTCTTGAGATGAGGAATTCAGAA
CAGCCAGCTTATGCGAAGTCTGGCCCTCAAGAGCTAGTTCAACAGGTTTTGAGTGTTGGC
TGGAAAGAGAACATTGATGTAGCAGGTGAGAATGCACTTTCAAGATATGACGGCTATGCC
TACAACCAAATCCTTCTCAATGCTAGGCCAAATGGTATCAACAAAAGTGGTCCACCAAAA
CTAAAGATGGCCGGGCTGACTTACCTTCGATTATCAGAAAAACTCCTCCAAAAAAGGAAC
TTCAATACCTTTAAAACATTTGTCAAGAAAATGCATGCCGATCTGGATTACTGTCCAGAA
TATGAAAAACCAGCTCCACTGGGCAGATCAAAAATGGAGATTTCAATGGATGAACTTGTA
GCAGCAACCCAACGAACAAAACCATTCCCATGGGATGAACAGACAGATGCAAGAATTGGC
GGTATATTGGCTGAATACTGGGATAGGCTGCTTAACACGTTCTTTCTCTCCAACTGA

Peptide Sequence

PEP ID

XP_016481933.1
PEP Infomation

PREDICTED: beta-amylase-like [Nicotiana tabacum]
Sequence

MNINMASIGPSKLGVMPEVMGFSHQELSLVMFKKFKLARKQLLQQNLTFTNRRKTGIAQA
IAPEATKATGATSSSVPLANYVPVYVMLPLDVISLDNVFRNQDKCEKQFKELRAAGVDGI
MVDVWWGIVEANGPRQYDWSAYRNLFQLVQKTGLKIQAIMSFHQCGGNIGDDVYIPIPKW
VLTIGENNPDIFYTNRAGTRNKECLSLAVDNQPLFESRTAVQMYSDYMRSFRENMSDFLE
AGSIVDIEVGLGPAGELRYPAYTQSQGWKFPGIGEFQCYDKHMRTDFKEAVTKAGYRQWD
LPDDAGTYNDIPVKTGFFGPNGTYLTEKGKFFLTWYSSKLLLHGDQILDEANKAFLGCKV
KLSAKVAGIHWWYKDASHAAELTSGYYNLDNREGYRPIARMLSRHHGTLNFTCLEMRNSE
QPAYAKSGPQELVQQVLSVGWKENIDVAGENALSRYDGYAYNQILLNARPNGINKSGPPK
LKMAGLTYLRLSEKLLQKRNFNTFKTFVKKMHADLDYCPEYEKPAPLGRSKMEISMDELV
AATQRTKPFPWDEQTDARIGGILAEYWDRLLNTFFLSN

Transcript Sequence

Gene sequence data has not been registered.